search DOI 10.17882/96690

STAVIRO example dataset, from data acquisition to the computation of Essential Biodiversity Variables and Essential Ocean Variables

This folder contains an example of STAVIRO dataset, based on the Entrecasteaux survey conducted in 2015 in the Natural Park of the Coral Sea. It includes: metadata, annotation files, files with Essential Biodiversity Variables (EBV) on fishes and benthic habitats, related documentation, examples of images, and related references. It is aimed at providing an example of underwater imagery dataset with complete documentation on the workflow from data acquisition to EBV production as defined in the French-Australian collaboration QuatreA. The information provided should enable a proper reuse of the data.

Disciplines

Biological oceanography, Fisheries and aquaculture

Keywords

essential biodiversity variable, essential ocean variable, underwater video, STAVIRO, Coral Sea Natural Park, fish community, benthic habitat, biodiversity metric, Fish abundance and distribution, FAIR principles, marine monitoring, ocean best practice, Marine turtles, birds, mammals abundance and composition, Hard coral cover and composition, Sea grass cover and composition, Macroalgal canopy cover and composition

Location

-17N, -19S, 164E, 162W

Devices

STAVIRO protocol

Ocean Best Practice reference: https://repository.oceanbestpractices.org/handle/11329/1939

Methodological guide (in French): https://doi.org/10.13155/46859

Reference paper for the protocol: https://doi.org/10.3389/fmars.2021.689280

Data

FileSizeFormatProcessingAccess
STAVIRO dataset example
95 MoZIPProcessed data
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How to cite
Pelletier Dominique, Schohn Thomas, Carpentier Liliane, Bockel Thomas, Garcia Jessica (2023). STAVIRO example dataset, from data acquisition to the computation of Essential Biodiversity Variables and Essential Ocean Variables. SEANOE. https://doi.org/10.17882/96690

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Related documents
Pelletier Dominique, Roos David, Bouchoucha Marc, Schohn Thomas, Roman William, Gonson Charles, Bockel Thomas, Carpentier Liliane, Preuss Bastien, Powell Abigail, Garcia Jessica, Gaboriau Matthias, Cade Florent, Royaux Coline, Le Bras Yvan, Reecht Yves (2021). A Standardized Workflow Based on the STAVIRO Unbaited Underwater Video System for Monitoring Fish and Habitat Essential Biodiversity Variables in Coastal Areas. Frontiers In Marine Science. 8 (689280). 17p.. https://doi.org/10.3389/fmars.2021.689280, https://archimer.ifremer.fr/doc/00708/82054/
Pelletier Dominique, Selmaoui‐folcher Nazha, Bockel Thomas, Schohn Thomas (2020). A regionally scalable habitat typology for assessing benthic habitats and fish communities: Application to New Caledonia reefs and lagoons. Ecology And Evolution. 10 (14). 7021-7049. https://doi.org/10.1002/ece3.6405, https://archimer.ifremer.fr/doc/00632/74433/
Schohn Thomas, Pelletier Dominique, Carpentier Liliane (2017). Video-based baseline assessment of fish assemblages and habitats of Entrecasteaux atolls, World Heritage and Coral sea natural Park = Etat de santé des habitats et peuplements de poissons des atolls d’Entrecasteaux, zone inscrite au Patrimoine Mondial de l’Humanité et Parc naturel de la mer de Corail. Evaluation initiale par stations vidéo rotatives STAVIRO. Ref. AMBIO/A/29. Ifremer. https://doi.org/10.13155/51760
Pelletier Dominique, Carpentier Liliane, Roman William, Bockel Thomas (2016). Unbaited rotating video for observing coastal habitats and macrofauna. Methodological guide for STAVIRO and MICADO systems = La vidéo rotative autonome pour l’observation des habitats et de la macrofaune côtiers. Guide méthodologique des systèmes STAVIRO et MICADO. Ref. AMBIO/A/1. ifremer. https://doi.org/10.13155/46859
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